This study examines how the presence of an endophytic fungus affects decomposition rates and fungal diversity in the grass Festuca thurberi along elevation gradients. In the first experiment, litter bags containing either endophyte-infected or endophyte-free F. thurberi litter were placed along three mountain transects to measure decomposition rates over time. The second experiment investigates how the endophyte affects host plant survival, growth, and biomass. Preliminary results show endophyte presence reduces plant biomass and survival. Fungal cultures were also taken from leaf tissues to analyze fungal community composition differences. The goal is to better understand how endophyte symbioses and climate interact to impact ecosystem processes
This study examined potential mechanisms for fern species coexistence in Catlins forests of New Zealand. The study analyzed differences in environmental traits between sites characterized by different dominant tree types (gymnosperm or angiosperm), and differences in functional traits between common fern species. Results showed soil temperature varied significantly between sites, with higher temperatures under gymnosperm trees. However, other environmental traits did not differ between sites. Significant differences were found for several functional traits (specific leaf area, specific root length, pinnae thickness, water use efficiency) between fern species. This supports the hypothesis that functional trait diversity, rather than environmental heterogeneity, is the prevailing mechanism allowing coexistence of fern species in these forests.
This document summarizes two field studies that evaluated how well different invertebrate taxa performed as environmental or biodiversity indicators compared to plants, vertebrates, and each other. The studies were conducted on restored bauxite and mineral sand mines in Western Australia. At both sites, ant assemblage composition reflected trends in other taxa to a greater degree than plants, vertebrates, or birds. Taking into account data yield per unit effort, ants performed moderately well as environmental indicators and extremely well as biodiversity indicators. Overall, most invertebrate groups provided a better return on effort than vertebrates as bioindicators.
This study examined the effects of water availability and genotype on the decomposition rate of switchgrass litter. Six genotypes of switchgrass representing different ploidy types and geographic origins were exposed to three different rainfall treatments (extreme drought, mean rainfall, extreme wet) over four months using the litterbag method. The results showed that decomposition rate generally increased with more rainfall availability but this effect depended on date. About a third of the variation in decomposition rate was explained by changes in maximum temperature from July to November. No significant effects of genotype or ploidy were found, suggesting that differences in litter chemistry among these genotypes were not large enough to impact decomposition rates. Overall climate factors like rainfall and temperature had a stronger influence on decomposition than litter chemistry traits
This document summarizes a modeling approach to examine how plants may alter nutrient competition by modifying nutrient availability in the rhizosphere through the release of chemicals from roots. The model builds on a previous model of nutrient competition between plant species by incorporating mechanistic descriptions of nutrient diffusion, plant exudation of chemicals, and plant nutrient uptake. Simulations using the model suggest that the mechanisms controlling competition for bioavailable nutrients depend on soil properties, nutrient properties, and the mobility of nutrients and exudated chemicals in the soil. When diffusion is limited, exudation benefits only the exuding species, but when diffusion is widespread, exudation can benefit all species.
This document discusses the role of network structure in community stability. It first notes that previous research found that nested network structures confer stability, but that species contributing most to nestedness are also more likely to go extinct. The document then outlines a plan to empirically evaluate these expectations using stability measures and analyses of nestedness contributions. It reviews different study designs and findings on pollinator responses to land use change. The goal is to map nestedness and extinction patterns worldwide to better understand what drives extinction order and how this relates to network structure.
Wild pollinators enhance fruit set of crops regardless of honey bee abundance. A study of 41 crop systems worldwide found universally positive associations between fruit set and wild insect visits, demonstrating the agricultural value of wild pollinators. In contrast, fruit set increased significantly with honey bee visits in only 14% of systems. Overall, wild insects were more effective pollinators as fruit set increased more with rising wild insect visitation rates compared to honey bees. The diversity and abundance of wild pollinators have declined in many agricultural landscapes, but the impacts of these declines on crop yields depends on whether wild insects or managed honey bees are more important pollinators for specific crops.
Regional and global elevational patterns of microbial species richness and ev...sediman
Although elevational gradients in microbial biodiversity have attracted increasing attention recently, the generality in the patterns and underlying mechanisms are still poorly resolved. Further, previous studies focused mostly on species richness, while left understudied evenness, another important aspect of biodiversity. Here, we studied the elevational patterns in species richness and evenness of stream bio lm bacteria and diatoms in six mountains in Asia and Europe. We also reviewed published results for elevational richness patterns for soil and stream microbes in a literature analysis. Our results revealed that even within the same ecosystem type (that is, stream) or geographical region, bacteria and diatoms showed contrasting patterns in diversity. Stream microbes, including present stream data, tend to show signi cantly increasing or decreasing elevational patterns in richness, contrasting the ndings for soil microbes that typically showed nonsigni cant or signi cantly decreasing patterns. In all six mountains for bacteria and in four mountains for diatoms, species richness and evenness were positively correlated. e variation in bacteria and diatom richness and evenness were substantially explained by anthropogenic driven factors, such as total phosphorus (TP). However, diatom richness and evenness were also related to di erent main drivers as richness was mostly related to pH, while evenness was most explained by TP. Our results highlight the lack of consistent elevational biodiversity patterns of microbes and further indicate that the two facets of biodiversity may respond di erently to environmental gradients.
This study examined potential mechanisms for fern species coexistence in Catlins forests of New Zealand. The study analyzed differences in environmental traits between sites characterized by different dominant tree types (gymnosperm or angiosperm), and differences in functional traits between common fern species. Results showed soil temperature varied significantly between sites, with higher temperatures under gymnosperm trees. However, other environmental traits did not differ between sites. Significant differences were found for several functional traits (specific leaf area, specific root length, pinnae thickness, water use efficiency) between fern species. This supports the hypothesis that functional trait diversity, rather than environmental heterogeneity, is the prevailing mechanism allowing coexistence of fern species in these forests.
This document summarizes two field studies that evaluated how well different invertebrate taxa performed as environmental or biodiversity indicators compared to plants, vertebrates, and each other. The studies were conducted on restored bauxite and mineral sand mines in Western Australia. At both sites, ant assemblage composition reflected trends in other taxa to a greater degree than plants, vertebrates, or birds. Taking into account data yield per unit effort, ants performed moderately well as environmental indicators and extremely well as biodiversity indicators. Overall, most invertebrate groups provided a better return on effort than vertebrates as bioindicators.
This study examined the effects of water availability and genotype on the decomposition rate of switchgrass litter. Six genotypes of switchgrass representing different ploidy types and geographic origins were exposed to three different rainfall treatments (extreme drought, mean rainfall, extreme wet) over four months using the litterbag method. The results showed that decomposition rate generally increased with more rainfall availability but this effect depended on date. About a third of the variation in decomposition rate was explained by changes in maximum temperature from July to November. No significant effects of genotype or ploidy were found, suggesting that differences in litter chemistry among these genotypes were not large enough to impact decomposition rates. Overall climate factors like rainfall and temperature had a stronger influence on decomposition than litter chemistry traits
This document summarizes a modeling approach to examine how plants may alter nutrient competition by modifying nutrient availability in the rhizosphere through the release of chemicals from roots. The model builds on a previous model of nutrient competition between plant species by incorporating mechanistic descriptions of nutrient diffusion, plant exudation of chemicals, and plant nutrient uptake. Simulations using the model suggest that the mechanisms controlling competition for bioavailable nutrients depend on soil properties, nutrient properties, and the mobility of nutrients and exudated chemicals in the soil. When diffusion is limited, exudation benefits only the exuding species, but when diffusion is widespread, exudation can benefit all species.
This document discusses the role of network structure in community stability. It first notes that previous research found that nested network structures confer stability, but that species contributing most to nestedness are also more likely to go extinct. The document then outlines a plan to empirically evaluate these expectations using stability measures and analyses of nestedness contributions. It reviews different study designs and findings on pollinator responses to land use change. The goal is to map nestedness and extinction patterns worldwide to better understand what drives extinction order and how this relates to network structure.
Wild pollinators enhance fruit set of crops regardless of honey bee abundance. A study of 41 crop systems worldwide found universally positive associations between fruit set and wild insect visits, demonstrating the agricultural value of wild pollinators. In contrast, fruit set increased significantly with honey bee visits in only 14% of systems. Overall, wild insects were more effective pollinators as fruit set increased more with rising wild insect visitation rates compared to honey bees. The diversity and abundance of wild pollinators have declined in many agricultural landscapes, but the impacts of these declines on crop yields depends on whether wild insects or managed honey bees are more important pollinators for specific crops.
Regional and global elevational patterns of microbial species richness and ev...sediman
Although elevational gradients in microbial biodiversity have attracted increasing attention recently, the generality in the patterns and underlying mechanisms are still poorly resolved. Further, previous studies focused mostly on species richness, while left understudied evenness, another important aspect of biodiversity. Here, we studied the elevational patterns in species richness and evenness of stream bio lm bacteria and diatoms in six mountains in Asia and Europe. We also reviewed published results for elevational richness patterns for soil and stream microbes in a literature analysis. Our results revealed that even within the same ecosystem type (that is, stream) or geographical region, bacteria and diatoms showed contrasting patterns in diversity. Stream microbes, including present stream data, tend to show signi cantly increasing or decreasing elevational patterns in richness, contrasting the ndings for soil microbes that typically showed nonsigni cant or signi cantly decreasing patterns. In all six mountains for bacteria and in four mountains for diatoms, species richness and evenness were positively correlated. e variation in bacteria and diatom richness and evenness were substantially explained by anthropogenic driven factors, such as total phosphorus (TP). However, diatom richness and evenness were also related to di erent main drivers as richness was mostly related to pH, while evenness was most explained by TP. Our results highlight the lack of consistent elevational biodiversity patterns of microbes and further indicate that the two facets of biodiversity may respond di erently to environmental gradients.
This study examined how mammalian decomposition contributes nutrients to soil and how insect activity affects decomposition rates and nutrient levels. Soil and rat cadavers were collected from different environments and placed in containers, with some exposed to insects and others limited. Soil pH, nitrates, and phosphates were tested over 21 days. Results showed insect exposure sped decomposition, initially lowering nutrient levels but increasing them later. While carcass sites showed no significant difference in vegetation from reference sites, insect activity appears to accelerate nutrient entry into soil and modulation of pH levels during decomposition.
Genotype x environment interaction analysis of tef grown in southern ethiopia...Alexander Decker
This document summarizes a study that evaluated 22 tef genotypes for grain yield performance across four locations in southern Ethiopia. Significant differences were found among genotypes and locations, and for the genotype x environment interaction. Analysis of variance and AMMI modeling were used to analyze the data. The study found that genotype DZ-Cr-255 was the most stable and high-yielding variety across locations. Areka and Hossana locations showed similar patterns of interaction and had higher average yields, indicating they may be better test environments. The first principal component axis from the AMMI analysis captured 48.7% of the genotype x environment interaction variance.
This study sought to determine if patterns of microbial diversity in canopy soil patches are consistent with patterns of diversity on islands as described by island biogeography theory. The researcher collected soil samples from the ground and canopy of trees in a Costa Rican cloud forest. Microbial morphospecies were identified and diversity metrics were calculated and compared between ground and canopy soil. Canopy soil had significantly lower species richness than ground soil, supporting the idea that canopy patches limit microbial diversity. However, other diversity patterns did not fully match island biogeography predictions, and ground-canopy microbial communities were more similar than expected. This suggests that movement between ground and canopy may not form as strong a barrier to microbial dispersal as the theory predicts.
The document summarizes a study that investigated how genetically variable germination timing in Arabidopsis thaliana influences the evolution of plant life histories. The researchers grew recombinant inbred lines of A. thaliana under different photoperiod and geographic conditions to manipulate germination timing. They found that adult life history traits exhibited strong plasticity depending on season of germination. The season of germination also significantly altered the strength, mode, and direction of natural selection on life history traits. However, the average plastic responses to season were not adaptive. Genetic variation in germination timing increased genetic variation in adult traits but did not increase heritability due to also increasing environmental variation. Under some conditions, plasticity in response to genetically variable germination
The passage describes several ecological concepts and methods used to study plant and animal populations and communities, including:
1) Factors that influence species distributions such as temperature, water, light, soil pH, salinity, and nutrients are outlined.
2) Random quadrat sampling and transect methods to study and compare population sizes and distributions are explained.
3) The niche concept including an organism's habitat, feeding activities, and interactions is defined.
4) Examples of species interactions like competition, herbivory, predation, parasitism, and mutualism are given.
5) The principles of competitive exclusion and distinguishing fundamental versus realized niches are explained.
6) Biom
This document discusses research on plant-animal interactions and chemical ecology at Cornell University. It covers two major areas of research: 1) studying plant secondary metabolites and defensive proteins, and how they influence population dynamics and community structure through plant-animal interactions, and 2) using physiological and genomic approaches to study coral resistance to disease. The research uses a wide range of molecular, chemical, and biological techniques in both laboratory and field settings. Researchers in chemical ecology at Cornell collaborate across departments and through organized courses and groups.
- The study quantified predation along an urbanization gradient in Denmark using artificial caterpillars that could be identified by marks left by predators.
- In forest habitats, chewing insects exerted the greatest predation pressure (52.1%), while ants and mammals had lower rates. In suburban forests, mammals had the highest rate of predation (22.2%). In urban forests, ants and chewing insects had similar predation rates of 16.4%.
- Predation rates varied seasonally, with chewing insects increasing from spring to autumn in forests, mammals highest in summer in suburban forests, and ants highest in spring in urban forests. Overall, caterpillars were more likely to survive in urban and suburban areas compared
This article examines how climate and herbivory have influenced the evolution of Senecio pterophorus, a plant native to South Africa that has invaded other regions. The study conducted a common garden experiment with populations from throughout the plant's native and introduced ranges, subjecting them to different watering treatments. It found that plants from introduced regions grew smaller and reproduced less than native plants, indicating genetic divergence related to climate differences rather than herbivory. Specifically, introduced plants adapted traits similar to native plants experiencing comparable drought conditions. The results suggest climate, not herbivory, has been the main driver of rapid evolution in S. pterophorus after invasion.
- NLCD Class and Climate Ratio were the best predictive factors for modeling the non-linear least squares fit (β) of cumulative fine root proportion at depth based on data from 27 NEON sites.
- Modeling was less accurate when including sites with more extreme climate ratios, indicating different factors may be needed to model those locations.
- The study aims to continentally model fine root biomass by collecting data from soil pits across the United States and using climate, soil, and ecological variables to predict β values.
Rachel Germain presented research on how spatial structure can cascade across trophic levels. Studies of aspen understory plants, tallgrass prairie plants, and milkweed insect specialists found that spatial constraints like patch size and isolation affected species differently depending on traits like dispersal ability and sensitivity to predators. For example, animal-dispersed aspen plant species showed non-island biogeography patterns, while predation modified biogeographic constraints for sensitive milkweed insects. The results emphasize that spatial dynamics are complex and vary within and among trophic levels in ways not fully captured by island biogeography theory alone.
This study examines the evolutionary rates of three physiological traits related to thermal tolerance—cold tolerance, body temperature, and heat tolerance—in a group of tropical lizards found across a range of thermal environments on Hispaniola. The researchers find that cold tolerance has evolved significantly faster than heat tolerance in these lizards. They suggest this is because behavioral thermoregulation more effectively shields the lizards from selection on upper (heat) tolerance compared to lower (cold) tolerance, since lizards in different environments behaviorally regulate their body temperature during the day to similar levels but nighttime temperatures cannot be fully buffered behaviorally. The findings provide insights into how exposure to selection through an organism's ability to behaviorally regulate temperature influences the pace
This review examines 19 studies that investigated the effects of various pollutants on the reproductive behavior of fish species. Several studies found changes in courtship behaviors like decreases in display frequency or increases in courtship duration. Studies of parental care found effects like decreased nest-building, reduced offspring defense, or changes in how care is divided between sexes. However, few studies measured impacts on reproductive success or population-level effects. The review develops a framework to explore links between pollution and reproductive behavior ecology, and how this could impact populations through life history tradeoffs, genetic changes, and population size.
Studies on Soil Microbes of Tropical Moist Forest in Federal University Otuok...IJEAB
Soil microbes vary according to forest stand and composition and this two governs soil condition. Rural farmers believe that moist or wet soil is not suitable for forest and agricultural production. This study investigated soil microbes in a tropical moist forest soil as well as the physico-chemical properties, on the backdrop that soil microbial population, organic carbon content, electrical conductivity, and acidity have been used as good indicators of soil fertility. Three forest stands were chosen viz; high forested area (site A), low forested area (site B), and cultivated area (site C) 5m x 5m sample plot sizes were mapped out from each selected site and one sample plot per selected area were randomly chosen for investigation. Soil samples were collected for analyses. Results shows that mean values for bacteria counts were not significantly different among the sites (p< 0.05). Mean values for fungi isolates were significantly different among the sites (p< 0.05), the mean values of bacteria counts for low forested soil and cultivated land were significantly different (p< 0.05) while site A was not. Mean values for the physico-chemical parameters investigated were not significantly different (p< 0.05) across the sites. The soil could sustain plantation forestry and crop production.
2012 - Hamilton et al. - Endophytic mediation of ROS Hamilton et al 2012Cyd Hamilton
This review summarizes the current literature on the role of reactive oxygen species (ROS) and antioxidants in plant-fungal endophyte interactions. The review discusses how ROS play a role in plant defense responses and stress signaling, while antioxidants help regulate ROS levels to prevent cell damage. Evidence suggests that mutualistic endophytes suppress the plant's ROS burst to avoid triggering defense, while still producing antioxidants that benefit the plant under stress. The review examines studies finding that fungal endophytes produce antioxidants both in culture and within plants (in planta), and that their presence increases host antioxidant activity when under stress. Overall, the interplay between ROS and antioxidants produced by the symbiont appears important in determining
Ecads, also known as ecophenes or habitat forms, are environmentally induced variations within the same genetic stock or species. The variations in morphology, such as shape, size, and reproductive capacity, are temporary responses to environmental influences. In contrast, ecotypes are genetically distinct populations that are adapted to different habitats through natural selection. Ecotypes retain their distinguishing morphological and physiological traits even when placed in a new environment. Examples of ecotypes include different forms of Euphorbia hirta that grow in grasslands versus footpaths, which differ greatly in appearance but remain inter-fertile.
Climate and environmental conditions greatly influence the distribution of organisms and create distinct biological communities. As species adapt to changes in their environment through traits like competition and succession, biodiversity increases. Communities are dynamic systems where species interact in various ways, such as competing for resources or gradually changing the plant types through succession over time.
A look int othe ecological food web of Aquaculture systems influenced by Permaculture. Also includes pictures of aquaculutre systems of Malaysia, Panama, Costa Rica, Bulgaria, Arkansas and Kentucky.
This study examined how mammalian decomposition contributes nutrients to soil and how insect activity affects decomposition rates and nutrient levels. Soil and rat cadavers were collected from different environments and placed in containers, with some exposed to insects and others limited. Soil pH, nitrates, and phosphates were tested over 21 days. Results showed insect exposure sped decomposition, initially lowering nutrient levels but increasing them later. While carcass sites showed no significant difference in vegetation from reference sites, insect activity appears to accelerate nutrient entry into soil and modulation of pH levels during decomposition.
Genotype x environment interaction analysis of tef grown in southern ethiopia...Alexander Decker
This document summarizes a study that evaluated 22 tef genotypes for grain yield performance across four locations in southern Ethiopia. Significant differences were found among genotypes and locations, and for the genotype x environment interaction. Analysis of variance and AMMI modeling were used to analyze the data. The study found that genotype DZ-Cr-255 was the most stable and high-yielding variety across locations. Areka and Hossana locations showed similar patterns of interaction and had higher average yields, indicating they may be better test environments. The first principal component axis from the AMMI analysis captured 48.7% of the genotype x environment interaction variance.
This study sought to determine if patterns of microbial diversity in canopy soil patches are consistent with patterns of diversity on islands as described by island biogeography theory. The researcher collected soil samples from the ground and canopy of trees in a Costa Rican cloud forest. Microbial morphospecies were identified and diversity metrics were calculated and compared between ground and canopy soil. Canopy soil had significantly lower species richness than ground soil, supporting the idea that canopy patches limit microbial diversity. However, other diversity patterns did not fully match island biogeography predictions, and ground-canopy microbial communities were more similar than expected. This suggests that movement between ground and canopy may not form as strong a barrier to microbial dispersal as the theory predicts.
The document summarizes a study that investigated how genetically variable germination timing in Arabidopsis thaliana influences the evolution of plant life histories. The researchers grew recombinant inbred lines of A. thaliana under different photoperiod and geographic conditions to manipulate germination timing. They found that adult life history traits exhibited strong plasticity depending on season of germination. The season of germination also significantly altered the strength, mode, and direction of natural selection on life history traits. However, the average plastic responses to season were not adaptive. Genetic variation in germination timing increased genetic variation in adult traits but did not increase heritability due to also increasing environmental variation. Under some conditions, plasticity in response to genetically variable germination
The passage describes several ecological concepts and methods used to study plant and animal populations and communities, including:
1) Factors that influence species distributions such as temperature, water, light, soil pH, salinity, and nutrients are outlined.
2) Random quadrat sampling and transect methods to study and compare population sizes and distributions are explained.
3) The niche concept including an organism's habitat, feeding activities, and interactions is defined.
4) Examples of species interactions like competition, herbivory, predation, parasitism, and mutualism are given.
5) The principles of competitive exclusion and distinguishing fundamental versus realized niches are explained.
6) Biom
This document discusses research on plant-animal interactions and chemical ecology at Cornell University. It covers two major areas of research: 1) studying plant secondary metabolites and defensive proteins, and how they influence population dynamics and community structure through plant-animal interactions, and 2) using physiological and genomic approaches to study coral resistance to disease. The research uses a wide range of molecular, chemical, and biological techniques in both laboratory and field settings. Researchers in chemical ecology at Cornell collaborate across departments and through organized courses and groups.
- The study quantified predation along an urbanization gradient in Denmark using artificial caterpillars that could be identified by marks left by predators.
- In forest habitats, chewing insects exerted the greatest predation pressure (52.1%), while ants and mammals had lower rates. In suburban forests, mammals had the highest rate of predation (22.2%). In urban forests, ants and chewing insects had similar predation rates of 16.4%.
- Predation rates varied seasonally, with chewing insects increasing from spring to autumn in forests, mammals highest in summer in suburban forests, and ants highest in spring in urban forests. Overall, caterpillars were more likely to survive in urban and suburban areas compared
This article examines how climate and herbivory have influenced the evolution of Senecio pterophorus, a plant native to South Africa that has invaded other regions. The study conducted a common garden experiment with populations from throughout the plant's native and introduced ranges, subjecting them to different watering treatments. It found that plants from introduced regions grew smaller and reproduced less than native plants, indicating genetic divergence related to climate differences rather than herbivory. Specifically, introduced plants adapted traits similar to native plants experiencing comparable drought conditions. The results suggest climate, not herbivory, has been the main driver of rapid evolution in S. pterophorus after invasion.
- NLCD Class and Climate Ratio were the best predictive factors for modeling the non-linear least squares fit (β) of cumulative fine root proportion at depth based on data from 27 NEON sites.
- Modeling was less accurate when including sites with more extreme climate ratios, indicating different factors may be needed to model those locations.
- The study aims to continentally model fine root biomass by collecting data from soil pits across the United States and using climate, soil, and ecological variables to predict β values.
Rachel Germain presented research on how spatial structure can cascade across trophic levels. Studies of aspen understory plants, tallgrass prairie plants, and milkweed insect specialists found that spatial constraints like patch size and isolation affected species differently depending on traits like dispersal ability and sensitivity to predators. For example, animal-dispersed aspen plant species showed non-island biogeography patterns, while predation modified biogeographic constraints for sensitive milkweed insects. The results emphasize that spatial dynamics are complex and vary within and among trophic levels in ways not fully captured by island biogeography theory alone.
This study examines the evolutionary rates of three physiological traits related to thermal tolerance—cold tolerance, body temperature, and heat tolerance—in a group of tropical lizards found across a range of thermal environments on Hispaniola. The researchers find that cold tolerance has evolved significantly faster than heat tolerance in these lizards. They suggest this is because behavioral thermoregulation more effectively shields the lizards from selection on upper (heat) tolerance compared to lower (cold) tolerance, since lizards in different environments behaviorally regulate their body temperature during the day to similar levels but nighttime temperatures cannot be fully buffered behaviorally. The findings provide insights into how exposure to selection through an organism's ability to behaviorally regulate temperature influences the pace
This review examines 19 studies that investigated the effects of various pollutants on the reproductive behavior of fish species. Several studies found changes in courtship behaviors like decreases in display frequency or increases in courtship duration. Studies of parental care found effects like decreased nest-building, reduced offspring defense, or changes in how care is divided between sexes. However, few studies measured impacts on reproductive success or population-level effects. The review develops a framework to explore links between pollution and reproductive behavior ecology, and how this could impact populations through life history tradeoffs, genetic changes, and population size.
Studies on Soil Microbes of Tropical Moist Forest in Federal University Otuok...IJEAB
Soil microbes vary according to forest stand and composition and this two governs soil condition. Rural farmers believe that moist or wet soil is not suitable for forest and agricultural production. This study investigated soil microbes in a tropical moist forest soil as well as the physico-chemical properties, on the backdrop that soil microbial population, organic carbon content, electrical conductivity, and acidity have been used as good indicators of soil fertility. Three forest stands were chosen viz; high forested area (site A), low forested area (site B), and cultivated area (site C) 5m x 5m sample plot sizes were mapped out from each selected site and one sample plot per selected area were randomly chosen for investigation. Soil samples were collected for analyses. Results shows that mean values for bacteria counts were not significantly different among the sites (p< 0.05). Mean values for fungi isolates were significantly different among the sites (p< 0.05), the mean values of bacteria counts for low forested soil and cultivated land were significantly different (p< 0.05) while site A was not. Mean values for the physico-chemical parameters investigated were not significantly different (p< 0.05) across the sites. The soil could sustain plantation forestry and crop production.
2012 - Hamilton et al. - Endophytic mediation of ROS Hamilton et al 2012Cyd Hamilton
This review summarizes the current literature on the role of reactive oxygen species (ROS) and antioxidants in plant-fungal endophyte interactions. The review discusses how ROS play a role in plant defense responses and stress signaling, while antioxidants help regulate ROS levels to prevent cell damage. Evidence suggests that mutualistic endophytes suppress the plant's ROS burst to avoid triggering defense, while still producing antioxidants that benefit the plant under stress. The review examines studies finding that fungal endophytes produce antioxidants both in culture and within plants (in planta), and that their presence increases host antioxidant activity when under stress. Overall, the interplay between ROS and antioxidants produced by the symbiont appears important in determining
Ecads, also known as ecophenes or habitat forms, are environmentally induced variations within the same genetic stock or species. The variations in morphology, such as shape, size, and reproductive capacity, are temporary responses to environmental influences. In contrast, ecotypes are genetically distinct populations that are adapted to different habitats through natural selection. Ecotypes retain their distinguishing morphological and physiological traits even when placed in a new environment. Examples of ecotypes include different forms of Euphorbia hirta that grow in grasslands versus footpaths, which differ greatly in appearance but remain inter-fertile.
Climate and environmental conditions greatly influence the distribution of organisms and create distinct biological communities. As species adapt to changes in their environment through traits like competition and succession, biodiversity increases. Communities are dynamic systems where species interact in various ways, such as competing for resources or gradually changing the plant types through succession over time.
A look int othe ecological food web of Aquaculture systems influenced by Permaculture. Also includes pictures of aquaculutre systems of Malaysia, Panama, Costa Rica, Bulgaria, Arkansas and Kentucky.
The document provides an invitation to get an inside look at something. It does not provide any other context or details about what specifically is being invited to get an inside look at.
Antibacterial Activity of Endophytic fungi isolated from Rhizophora mucronataDomingo Clarito
This study aimed to isolate endophytic fungi from the mangrove plant Rhizophora mucronata and test their antibacterial activity against Staphylococcus aureus and Escherichia coli. A total of 5 fungal strains were isolated from leaf, stem, and root tissues. Penicillium sp. extracted from the roots showed the strongest antibacterial activity against both bacteria in a Kirby-Bauer test. The results suggest that endophytic fungi from mangroves are a potential source of antibacterial compounds, with Penicillium sp. being the most potent against foodborne pathogens.
Titulo Ponencia: Endophytes Identification: morphological methods
Autor: Dr. Gary Strobel
Evento TF Innova:
Workshop Biotechnology "Isolation and identification of endophytic fungi from vascular plants"
Los días 20 y 21 de mayo de 2014, la Fundación Ramón Areces organizó el Simposio Internacional 'Microorganismos beneficiosos para la agricultura y la protección de la biosfera' dentro de su programa de Ciencias de la Vida y de la Materia.
This document provides an overview of Apache Hadoop, including its architecture, components, and applications. Hadoop is an open-source framework for distributed storage and processing of large datasets. It uses Hadoop Distributed File System (HDFS) for storage and MapReduce for processing. HDFS stores data across clusters of nodes and replicates files for fault tolerance. MapReduce allows parallel processing of large datasets using a map and reduce workflow. The document also discusses Hadoop interfaces, Oracle connectors, and resources for further information.
This document summarizes research on quantifying the plant growth promoting traits of various poplar endophytic bacteria isolates. Endophytes live symbiotically within plants and can fix nitrogen, solubilize phosphate, and produce hormones like IAA. The document reports on experiments that quantified nitrogen fixation, siderophore production, IAA production, phosphate solubilization, and genotypic identification of several endophytic bacterial isolates collected from poplar trees. It concluded that understanding the interactions of multiple endophytic strains and their combined effects on plant growth is needed.
El documento trata sobre el curso de Ingeniería en Sistemas. Se menciona que se vieron varios temas como Excel, configuración de computadoras, presentaciones en Prezi y cómo realizar trabajos en bloque.
La epistemología trata de los problemas filosóficos relacionados con la teoría del conocimiento, incluyendo los tipos de conocimiento posible y la relación entre el sujeto y el objeto conocido. El conocimiento puede transmitirse explícitamente a través de la comunicación formal o ser implícito y difícil de comunicar cuando se relaciona con experiencias personales. La didáctica se refiere a los contenidos, materiales y juegos educativos, pero a menudo se pierde de vista su definición teórica sobre qué significa exactamente.
Ronselle Moreno is applying for a dental assistant position. While new to dental assisting, Ronselle has an enthusiastic attitude and is an eager learner. Ronselle has previous experience working in a doctor's office and possesses excellent customer service, written, and verbal skills. Prior employers noted Ronselle is trustworthy, focused on work, and personable. References and a resume are available. Ronselle hopes to be contacted for an interview to utilize skills in dental assisting, administration, and customer service.
Lenette Howard - Think Marketing
I’m bilingual, stuck with an accent for life, cook every day, developed a love for classic cars, have a slight obsession with the gym, 60’s fashion, and futuristic gadgets, especially ones that automate mundane repetitive tasks.
I can get my point across in 140 characters
I can juggle multiple platforms, and content bases
There is a Bigger Picture.
I have a hunger to learn what I do not know yet.
I enjoy my job and the work I do.
I like to shake things up, experience new things, and avoid anything that makes life monotonous or mundane, because habit is the killer of diversity of experience.
I am calm under pressure, know when to realise not everything is an emergency, don’t have a lot of drama surrounding me, and I’m not found on most days crying under my desk.
I understand how people think, although I’m not saying I have solved the Men are From Mars, Women are From Venus conundrum.
I have experience dealing with negative noise and online communities.
I am an insomniac, because my job cannot be done by someone looking to keep 9-5 hours.
I sizzle with bags of create energy. I love beautiful things.
Isolation and characterization of an extracellular antifungal protein from an...Maulik Kamdar
The document describes a thesis project that aims to isolate and characterize an extracellular antifungal protein (exAFP-C28) from an endophytic fungal isolate. The objectives are to isolate the fungal strain from a medicinal plant, optimize culture conditions, purify the protein, and determine its antifungal activity and mechanism of action against Candida albicans through assays and microscopy. Results showed that the protein was effective against C. albicans by disrupting cell membranes, had a molecular weight of 28.2 kDa, and likely forms amphipathic helices contributing to its antifungal activity.
Introduction to endophytes and their application to develop commercial productsPrograma TF Innova
Ponencia: Introduction to endophytes and their application to develop commercial products
Autor: Dr. Gary Strobel
Evento TF Innova: Workshop Biotechnology "Isolation and identification of endophytic fungi from vascular plants"
Madhankumar J is seeking an opportunity to utilize his experience in animation and skills to contribute effectively to an organization. He has a B.Tech in Information Technology from Karpagam Institute of Technology and completed an Advanced Animation program at Arena Animation. His professional experience includes freelancing and working as a Junior SFX artist. He has knowledge of rigging, animation, modeling in Maya, and Unity3D.
Veruschka Von Lehndorff was a German supermodel in the 1960s known for her tall stature of 6 feet and striking features. After a difficult childhood in Germany during and after World War 2, she was discovered in Florence, Italy and joined the Ford modeling agency. She became highly popular in the 1960s, making up to $10,000 per day, and was known as the "first supermodel of the sixties" who helped create the standard for very thin models. She had notable appearances in films like Blow Up and maintained an active career into her later years.
The Effects of Climate Change on BumblebeeLewis Pell
The document discusses the effects of climate change on bumblebee populations and their habitats. It finds that climate change is causing increased temperatures that disrupt bumblebee emergence patterns and food resources, leading to asynchronous behaviors between bees and flowering plants. Studies show climate change is also linked to decreasing bee ranges and abundances. The document recommends establishing protected habitats and monitoring practices to help conserve vulnerable bumblebee species threatened by climate change impacts.
Why is it important to study reactions norms to understand phenotypi.pdfarrowmobile
Why is it important to study reactions norms to understand phenotypic plasticity?
Solution
Ans:
Phenotypic plasticity, the capacity of a single genotype to exhibit variable phenotypes in
different environments, is common in insects and is often highly adaptive. Phenotypic plasticity
is important because it expands the existing “genocentric” evolutionary theory, producing an
encompassing paradigm to explain life on earth. Plasticity was once considered “noise” but is
now widely recognized as potentially adaptive under a wide array of circumstances. As with any
major shift in scientific thinking, phenotypic plasticity engenders new ideas, causing us to ask
new questions and test hypotheses that would not otherwise be examined, leading us to
productive new scientific insights.
Phenotypic plasticity is counterbalance to mutation driven evolution: It is not surprising that
during the first half of the 20th Century, scientists, flushed with excitement about Mendelian
genetics, viewed evolution primarily as a mutational process. However, this bias largely ignored
an important reality of evolution – that natural selection selects not among genotypes, but among
phenotypes. Thus, the phenotype, and variation among phenotypes, plays a major role in
evolution. And, because the environment in which an individual develops determines its
phenotype, the environment also assumes a greater role in evolution, and may, in fact, produce
more viable phenotypic variation than do mutations. This is because mutations are not only rare,
but usually deleterious. In contrast, a single environmental factor may alter the phenotypes of an
entire population, providing natural selection with access to perhaps thousands of
environmentally altered individuals, as opposed to a single mutant individual. In addition,
mutations generally arise randomly with no correlation to specific environments, whereas new
environmentally induced phenotypes are both directional and highly correlated with the specific
new environment, allowing new environments to immediately produce and select among new
phenotypes.
Including phenotypic plasticity produces a better model: As suggested above, the inclusion of
phenotypic plasticity can result in a better model than mutation-allelic substitution alone in
explaining the production of organismal diversity. For example, the initial evolution of warning
color (aposematism), starting as a rare mutation is problematic because conspicuous prey should
be quickly found and removed by predators (Lindström et al. 2001). In contrast, evolution of
aposematism is easily explained by phenotypic plasticity (Sword 2002). Likewise, for
development, phenotypic plasticity explains the evolution of allometry and exaggerated
morphologies (Emlen and Nijhout 2000, Shingleton et al. 2007). For physiology, phenotypic
plasticity explains adaptive, beneficial plasticities such as acclimation and response to exercise
(Swallow et al. 2005), quite well. In ecology, it aids our un.
Diversity of Soil Fauna and Ecosystem Function tariqulmasud12
Soils are natural resources of utmost. Importance for a number of ecosystem and biosphere processes such as plant production, cycling of organic matter and nutrients, storage of C and water, and release of nitrous oxides, CO2 and methane. Soil degradation, through various processes, is a matter of great concern, since their integrity is absolutely critical to increasing food production (FAO, 1995), and regulating atmospheric fluxes of greenhouse gases (Jenkinson, 199 1 ; Wallace, 1994).
This document summarizes a study on variations in abdominal pigmentation in Drosophila immigrans populations across different altitudes. Six populations of D. immigrans were collected from different altitudes ranging from 600-2200 meters. The populations were analyzed for traits related to ecophysiology (abdominal pigmentation, desiccation resistance, cuticular water loss) and reproductive fitness (copulation duration, fecundity rate). Populations from higher altitudes showed darker abdominal pigmentation which correlated with better desiccation resistance. Darker individuals also had longer copulation durations and higher fecundity, indicating reproductive advantages in colder environments. The results suggest abdominal pigmentation plays a role in thermal balance and reproductive success
Effect of different bulking materials and earthworms species on bioremediatio...Alexander Decker
This study investigated the effect of different bulking materials (cow dung, sheep manure, garden soil) and earthworm species (Eudrilus eugeniae and Eisenia foetida) on the bioremediation of municipal sewage sludge. The results showed that interactions between worm species and bulking materials significantly affected moisture content, EC, and chloride levels but not pH or organic carbon. Organic carbon, EC, and chloride levels generally decreased from the initial to final stages of vermiremediation. The combination of cow dung and Eudrilus eugeniae led to the lowest levels of EC, organic carbon, and chloride, indicating it was the most effective treatment for bioremedi
Wurzbacher, Grimmett, Bärlocher, 2016. Metabarcoding fungal diversity Ivan Grimmett
This document summarizes a study that characterized fungal communities on coarse particulate organic matter (CPOM) like leaves and fine particulate organic matter (FPOM) in a stream in Nova Scotia, Canada using metabarcoding. Maple leaves were exposed in the stream for 4 weeks and 4 FPOM size fractions were collected over the same period by filtration. Pyrosequencing of the samples identified a total of 821 fungal operational taxonomic units, with 726 exclusive to particle samples and 47 to leaf samples. The study aimed to shed light on fungal processing of organic matter in streams and broaden understanding of freshwater fungal diversity.
This document provides a literature review on the effects of top predators on biodiversity and ecosystem functions. It discusses how top predators regulate trophic cascades and food webs through controlling prey populations. The loss of top predators like wolves and lynx in Germany has allowed herbivore populations to increase, impacting vegetation. Reintroducing these predators could help control ungulate numbers and damage. The document also examines factors that reduce top predator populations in human-dominated landscapes, such as habitat loss, poaching, and conflicts with livestock.
This study examined the use of earthworm Eisenia fetida as a bioindicator of arsenic levels in Hawaiian soils formerly used for sugarcane cultivation. Earthworms were exposed to soils containing different concentrations of arsenic through a microcosm experiment. Results showed that earthworm growth peaked at around 2 mg/kg of bioaccessible arsenic, indicating a hormetic effect of low arsenic doses. However, growth decreased with further increasing arsenic concentrations. This demonstrated that E. fetida can serve as a bioindicator of arsenic levels in soils and that low doses may act as a stimulant before becoming toxic at higher concentrations.
Shifts in phenology due to global climate change: The need for a yardstickSimoneBoccuccia
This document reviews examples of shifts in phenology (timing of seasonal activities) of species due to climate change. It argues that to properly interpret observed shifts in a species' phenology, a "yardstick" is needed - a measure of how much the species' environment and conditions have shifted due to climate change. The paper examines a few examples where both a species' phenology and aspects of its environment/food sources have been measured over long periods. In most examples, the species has shifted its phenology either too little or too much compared to shifts in its ecological conditions, suggesting many species are becoming mistimed due to climate change. The authors urge more research linking phenological data on species to potential yardsticks to better
vol. 191, no. 1 the american naturalist january 2018E-Articl.docxjessiehampson
vol. 191, no. 1 the american naturalist january 2018
E-Article
Thermoregulatory Behavior Simultaneously Promotes
and Forestalls Evolution in a Tropical Lizard
Martha M. Muñoz1,* and Jonathan B. Losos2
1. Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia 24060; 2. Department of Organismic and Evolutionary Biology,
Harvard University, Cambridge, Massachusetts 02138
Submitted January 11, 2017; Accepted July 21, 2017; Electronically published October 25, 2017
Online enhancements: appendix.
abstract: The role of behavior in evolution has long been discussed,
with some arguing that behavior promotes evolution by exposing
organisms to selection (behavioral drive) and others proposing that
it inhibits evolution by shielding organisms from environmental var-
iation (behavioral inertia). However, this discussion has generally fo-
cused on the effects of behavior along a single axis without considering
that behavior simultaneously influences selection in various niche
dimensions. By examining evolutionary change along two distinct
niche axes—structural and thermal—we propose that behavior si-
multaneously drives and impedes evolution in a group of Anolis
lizards from the Caribbean island of Hispaniola. Specifically, a behav-
ioral shift in microhabitat to boulders at high altitude enables thermo-
regulation, thus forestalling physiological evolution in spite of colder
environments. This same behavioral shift drives skull and limb evolu-
tion to boulder use. Our results emphasize the multidimensional ef-
fects of behavior in evolution. These findings reveal how, rather than
being diametrically opposed, niche conservatism and niche lability
can occur simultaneously. Furthermore, patterns of niche evolution
may vary at different geographic scales: because of thermoregulatory
behavior, lizards at high and low elevation share similar microclimatic
niches (consistent with niche conservatism) while inhabiting distinct
macroclimatic environments (consistent with niche divergence). To-
gether, our results suggest that behavior can connect patterns of niche
divergence and conservatism at different geographic scales and among
traits.
Keywords: niche evolution, behavior, thermoregulation, Caribbean,
lizard, Bogert effect.
Introduction
For nearly a century, behavior has been recognized as a
key pacemaker for evolution (discussed in Huey et al. 2003;
Duckworth 2009). On the one hand, behavior can facilitate
evolutionary change; as organisms explore novel environ-
ments, they experience new selective pressures that can lead
* Corresponding author; e-mail: [email protected]
Am. Nat. 2018. Vol. 191, pp. E000–E000. q 2017 by The University of Chicago.
0003-0147/2018/19101-57488$15.00. All rights reserved.
DOI: 10.1086/694779
This content downloaded from 130.0
All use subject to University of Chicago Press Term
to phenotypic adaptations and speciation (Miller 1956;
Lande 1981; Wyles et al. 1983; Bateson 1988; West-Eberhard
1989; Sol et al. 20 ...
Article 4 Apes in a changing world - the effects of global warmin.docxfredharris32
Article 4: Apes in a changing world - the effects of global warming on the behaviour and distribution of African apes J. Lehmann et al. Global warming and ape biogeography.
Sourse: Lehmann, Julia, Amanda H. Korstjens, and Robin I. M. Dunbar. "Apes In A Changing World - The Effects Of Global Warming On The Behaviour And Distribution Of African Apes J. Lehmann Et Al. Global Warming And Ape Biogeography." Journal Of Biogeography 37.12 (2010): 2217-2231. Academic Search Premier. Web. 7 Feb. 2015.
O R I G I N A L
A R T I C L E
Apes in a changing world – the effects
of global warming on the behaviour
and distribution of African apes
Julia Lehmann1,2*, Amanda H. Korstjens1,3 and Robin I. M. Dunbar1,4
1British Academy Centenary Research Project,
School of Biological Sciences, Crown Street,
University of Liverpool, Liverpool L69 7ZB,
UK,
2
Department of Life Sciences, Roehampton
University, London SW15 4JD, UK,
3
Conservation Sciences, Bournemouth
University, Poole BH12 5BB, UK, 4Institute of
Cognitive and Evolutionary Anthropology,
University of Oxford, Oxford OX2 6PE, UK
*Correspondence: Julia Lehmann, Life Science
Department, Holybourne Avenue, Roehampton
University, London SW15 4JD, UK.
E-mail: [email protected]
A B S T R A C T
Aim In this study we use a modelling approach to identify: (1) the factors
responsible for the differences in ape biogeography, (2) the effects that global
warming might have on distribution patterns of African apes, (3) the underlying
mechanisms for these effects, and (4) the implications that behavioural flexibility
might be expected to have for ape survival. All African apes are highly
endangered, and the need for efficient conservation methods is a top priority. The
expected changes in world climate are likely to further exacerbate the difficulties
they face. Our study aims to further understand the mechanisms that link climatic
conditions to the behaviour and biogeography of ape species.
Location Africa.
Method We use an existing validated time budgets model, derived from data on
20 natural populations of gorillas (Gorilla beringei and Gorilla gorilla) and
chimpanzees (Pan troglodytes and Pan paniscus), which specifies the relationship
between climate, group size, body weight and time available for various activities,
to predict ape distribution across Africa under a uniform worst-case climate
change scenario.
Results We demonstrate that a worst-case global warming scenario is likely to
alter the delicate balance between different time budget components. Our model
points to the importance of annual temperature variation, which was found to
have the strongest impact on ape biogeography. Our simulation indicates that
rising temperatures and changes in rainfall patterns are likely to have strong
effects on ape survival and distribution, particularly for gorillas. Even if they
behaved with maximum flexibility, gorillas may not be able to survive in most of
their present habitat ...
Experiments with duckweed–moth systems suggest thatglobal wa.docxelbanglis
Experiments with duckweed–moth systems suggest that
global warming may reduce rather than promote
herbivory
TJISSE VAN DER HEIDE, RUDI M. M. ROIJACKERS, EDWIN T. H. M. PEETERS AND
EGBERT H. VAN NES
Department of Environmental Sciences, Aquatic Ecology and Water Quality Management group, Wageningen University,
Wageningen, The Netherlands
SUMMARY
1. Wilf & Labandeira (1999) suggested that increased temperatures because of global
warming will cause an increase in herbivory by insects. This conclusion was based on the
supposed effect of temperature on herbivores but did not consider an effect of temperature
on plant growth.
2. We studied the effect of temperature on grazing pressure by the small China-mark moth
(Cataclysta lemnata L.) on Lemna minor L. in laboratory experiments.
3. Between temperatures of 15 and 24 �C we found a sigmoidal increase in C. lemnata
grazing rates, and an approximately linear increase in L. minor growth rates. Therefore, an
increase in temperature did not always result in higher grazing pressure by this insect as
the regrowth of Lemna changes also.
4. At temperatures below 18.7 �C, Lemna benefited more than Cataclysta from an increase in
temperature, causing a decrease in grazing pressure.
5. In the context of global warming, we conclude that rising temperatures will not
necessarily increase grazing pressure by herbivorous insects.
Keywords: Cataclysta, grazing, herbivory, Lemna, temperature
Introduction
Duckweeds (Lemnaceae) are often abundant in dit-
ches and ponds (Landolt, 1986). Especially when
nitrogen and phosphorus concentrations in the water
column are high, the surface area can become covered
with dense floating mats of duckweed (Lüönd, 1980,
1983; Portielje & Roijackers, 1995). These mats have
large impacts on freshwater ecosystems, restricting
oxygen supply (Pokorny & Rejmánková, 1983), light
availability of algae and submerged macrophytes
(Wolek, 1974) and temperature fluxes (Dale &
Gillespie, 1976; Landolt, 1986; Goldsborough, 1993).
These changed conditions often have a negative effect
on the biodiversity of the ecosystem (Janse & van
Puijenbroek, 1998). Other free-floating plants such as
red water fern (Azolla filiculoides), water hyacinth
(Eichhornia crassipes) and water lettuce (Pistia stratiotes)
often cause serious problems in tropical and sub-
tropical regions (Mehra et al., 1999; Hill, 2003).
Various species of herbivorous insects consume
free-floating macrophytes. Several species of weevils
(Coleoptera: Curculionidae) are able to consume large
amounts of red water fern, water hyacinth and water
lettuce (Cilliers, 1991; Hill & Cilliers, 1999; Aguilar
et al., 2003), while the larvae of the semi-aquatic Small
China-mark moth (Cataclysta lemnata) are capable of
removing large parts of floating cover of Lemnaceae
covers (Wesenberg-Lund, 1943). Duckweed is not
only used as food source, but also as building material
Correspondence: Rudi M. M. Roijacker ...
O R I G I N A L A RT I C L Edoi10.1111evo.13631Two d.docxamit657720
This study examines evolutionary changes over two decades in the annual plant Brassica rapa in response to fluctuations in precipitation and drought in California. Seeds were collected from two populations at four time points spanning 18 generations. In resurrection experiments, plants from ancestral and descendant generations were grown under control and drought conditions to test for evolutionary changes in drought response traits. The study found evidence that B. rapa evolved earlier flowering and reduced stem diameter and water use efficiency in response to drought, but that occasional wet periods reversed these adaptations, potentially making the species less adapted to increasing drought severity. Evolutionary responses sometimes differed between the two populations.
O R I G I N A L A RT I C L Edoi10.1111evo.13631Two d.docxvannagoforth
O R I G I N A L A RT I C L E
doi:10.1111/evo.13631
Two decades of evolutionary changes in
Brassica rapa in response to fluctuations in
precipitation and severe drought
Elena Hamann,1,2 Arthur E. Weis,3 and Steven J. Franks1
1Department of Biological Sciences, Fordham University, Bronx, New York 10458
2E-mail: [email protected]
3Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON M5S 3B2, Canada
Received March 27, 2018
Accepted October 5, 2018
As climate changes at unprecedented rates, understanding population responses is a major challenge. Resurrection studies can
provide crucial insights into the contemporary evolution of species to climate change. We used a seed collection of two Californian
populations of the annual plant Brassica rapa made over two decades of dramatic precipitation fluctuations, including increasingly
severe droughts. We compared flowering phenology, other drought response traits, and seed production among four generations,
grown under drought and control conditions, to test for evolutionary change and to characterize the strength and direction of
selection. Postdrought generations flowered earlier, with a reduced stem diameter, and lower water-use efficiency (WUE), while
intervening wet seasons reversed these adaptations. There was selection for earlier flowering, which was adaptive, but delayed
flowering after wet years resulted in reduced total seed mass, indicating a maladaptive response caused by brief wet periods.
Furthermore, evolutionary changes and plastic responses often differed in magnitude between populations and drought periods,
suggesting independent adaptive pathways. While B. rapa rapidly evolved a drought escape strategy, plant fitness was reduced
in contemporary generations, suggesting that rapid shifts in flowering time may no longer keep up with the increasing severity
of drought periods, especially when drought adaptation is slowed by occasional wet seasons.
K E Y W O R D S : Drought escape, global change, phenotypic plasticity, phenology, rapid evolution, resurrection study.
There is now abundant evidence that climate change and altered
precipitation patterns (IPCC 2014) trigger large-scale species
losses, shifts in vegetation communities, and evolutionary plant
responses (Parmesan and Yohe 2003; Jump and Penuelas 2005;
Parmesan 2006; Franks et al. 2014). Particularly well documented
are worldwide shifts in flowering time following advanced spring-
time (Menzel et al. 2006; Miller-Rushing and Primack 2008;
Cleland et al. 2012). While much of the shift in this trait may be
due to the direct effects of temperature on developmental rate,
some could be due to an evolutionary response to selection im-
posed by a warmer environment (Nicotra et al. 2010; Hoffmann
and Sgro 2011; Merila and Hendry 2014; Gugger et al. 2015;
Stoks et al. 2016). Phenotypic plasticity, in which organisms re-
spond to changes in environmental conditions, is itself ge ...
Artigo para seminario de ecologia de ecossistemasFabiano Capato
This document summarizes a study that assessed the seasonal response of riverine microbial communities to glyphosate exposure. Two 14-day microcosm experiments were conducted using communities collected in spring and summer from a river frequently contaminated with glyphosate. The experiments showed little effect of a 10 mg/L glyphosate exposure on algal biomass, bacterial activity, or bacterial diversity. Effects on algal composition and eukaryotic diversity were only detected in the summer samples. The results demonstrate that while a short pulse of glyphosate at 10 mg/L seems to have limited effects, the response of natural microbial communities can vary seasonally and between experiments.
Scenario of insect pest under climate change situation & future challenges in...AJAY KUMAR
Here is a description of the insect population in current insect population and there scenario change with time. Current insect scenario and future challenges in India.
This document reports on a study that examined the relationship between bacterial diversity and primary productivity in aquatic mesocosms designed to mimic small ponds. The key findings were:
1) Bacterial richness, as estimated by sequencing 16S rDNA from samples, varied along the gradient of primary productivity created by altering nutrient inputs in the mesocosms.
2) Different bacterial taxonomic groups (Cytophaga-Flavobacteria-Bacteroides, Alpha-proteobacteria, Beta-proteobacteria) exhibited different relationships between richness and productivity - hump shaped, U-shaped, and no relationship, respectively.
3) This is one of the first studies to demonstrate that bacterial diversity
Relationship Between Sampling Area, Sampling Size Vs...Jessica Deakin
This document discusses the importance of order in the public realm and how planning, zoning, transects, and urbanism theories help shape our environment. It mentions several authors who have discussed problems with urban design and provided solutions to make the public realm a better place. The document argues that by improving order and the urban framework, cities could become more cohesive in design.
Relationship Between Sampling Area, Sampling Size Vs...
Spellman_Paper
1. An Endophyte alters biological characteristics of the grass species Festuca
thurberi
Part I: Does endophyte symbiosis alter decomposition along altitudinal
gradients?
Part II: How does endophyte symbiosis affect host survival and growth?
Student: Ian Spellman
Mentor: Jennifer Rudgers
Independent Research and Course
Summer 2014
2. Abstract
Plant-fungal symbioses are found in ecosystems worldwide, but relatively little is
known about how these two organisms affect each other. This study sought to shed
light on this topic. The first experiment tested to see if the presence of an endophyte
(genus Epichloë) effected the decomposition rates of its host grass (Festuca thurberi)
and on fungal composition in litter, and whether or not the effect is different along
elevation gradients. The second experiment tested for survival, growth and biomass
differences between plants naturally associated with an endophyte, plants naturally
endophyte-free, and plants which have had their endophyte removed using the
fungicide Benomyl.
Results thus far have shown that the presence of an endophyte has had a negative
effect on plant biomass and survival over the course of the four years since the
experiment was began, which agrees with findings of past studies. Endophyte status
does not appear to play a significant role in determining free-living fungal associate
diversity among plants. However, fungal composition significantly differed between
live and dead leaf tissue.
Upon the conclusion of this study, we will have gained a greater understanding of
ecology of grasses and their symbionts, how endophyte symbioses affect other
fungal taxa (decomposers), and how all of these species interactions affect overall
ecosystem functioning.
Part I: Does endophyte symbiosis alter decomposition along altitudinal
gradients?
Introduction
Global climate change is poised to alter biological systems in many ways. By
the year 2100 it is estimated that the world will see a 2-4.5°C rise in mean annual
temperatures, resulting in consequences such as shifts in patterns of precipitation
(Solomon et al. 2007), plant respiration (Ryan 1991), food production (Parry et al.
2004), hydrology (Arnell & Reynard 1996; Christensen et al. 2004), and biodiversity
(Sala et al. 2000; Xu et al. 2009).
3. One method of testing how biological systems may respond to shifts in
climate is the use of elevation gradients to mimic the effects of warming (Fukami &
Wardle 2005; McCain & Colwell 2011; Sundvquist et al. 2013). Using gradients has
proven to be a useful method of study as mountains occur on all seven continents;
thus elevation can be replicated both regionally and worldwide (Callaway et al.
2002; Harsch et al. 2009; McCain 2009). Past studies have shown many biological
activities changing in response to elevation, including plant biomass and
aboveground net primary production (NPP) (Whittaker et al 1974; Raich et al.
1997), nutrient cycling (Lovett & Kinsman 1990; Jacot et al. 2000a; Groffman et al.
2009), and community range (Whittaker 1956; Sanders et al. 2007; Bahram et al.
2012).
Plant-symbiotic endophytic fungi are found almost everywhere on the planet,
with a diversity rivaling that of insects (Caroll 1988; Arnold et al. 2000), and are
estimated to inhabit 20-30% of all grass species (Leuchtmann 1992). These fungi
provide various services to their hosts including protection from herbivory (Clay
1996), pathogen damage (Arnold et al. 2003), and abiotic stress (Malinowski &
Belesky 2000; Song et al. 2012) in exchange for organic materials. Fungal symbioses
may also be important in mitigating abiotic stresses caused by climate change
(Marks & Clay 1996; Kivlin et al. 2013), as well as altering ecosystem processes and
characteristics such as forest succession (Rudgers et al. 2007) and species diversity
(Rudgers & Clay 2008).
The decomposition rates of plant litter along elevation gradients have also
garnered recent interest. Rates have been found to be higher at lower elevations due
4. to warmer temperatures (Wang et al. 2009; Salinas et al. 2011). However, this
process can be species or location-specific (Shaw and Harte 2001). For example, in
Colorado, USA, Englemann spruce needle decomposition decreased linearly with
elevated temperature (ie lower elevation) due to a 63% loss of soil moisture. The
same study also found that total ecosystem carbon decreased ~50% with a rise in
temperature due in part to a decline in dead wood (Kueppers & Harte 2005).
Regardless, the majority of evidence suggests that nutrient release from litter
usually occurs at a faster rate at lower elevations (Vitousek et al. 1994), which
enhances the supply of nutrients from the soil and can drive further biological
activity. However this pattern is not always the case (e.g., Murphy et al. 1998), likely
due to an overriding influence of factors other than temperature, such as
precipitation (Vitousek et al. 1994) and plant functional traits (Vitousek et al. 1988;
Salinas 2011).
Despite the growing knowledge regarding altitudinal patterns of
decomposition and fungal endophytes, little is known about the role of this
interaction at different elevations. This study asks the question: Does the presence
of an endophyte (genus Epichloë) affect the rate at which its host grass (Festuca
thurberi) decomposes across altitudinal gradients? Although some previous work
found that endophyte-infected (E+) litter decomposed slower than endophyte-free
(E-) litter (Omacini et al. 2004; Lemons et al. 2005), there has yet to be any study
into how different elevations might affect this interaction. This is an important
factor to consider regarding decomposition because it could allow for further
understanding of how it might be affected by global temperature increases, as well
5. as how climate may alter the effects of symbionts on carbon cycling in ecosystems
(Iqbal et al. 2013). A change in this process in the face of climate change has the
potential to alter ecosystem functioning, but the role of fungal symbionts in this
context remains poorly understood. We hypothesize that the decomposition rate of
E+ litter will be slower than that of E- litter across elevations. To better understand
the microbial diversity associated with this community of F. thurberi, we also
cultured fungi from leaves and tillers of both E+ and E- plants. We expected to see
significant differences in this diversity between both tissue type and endophyte
status.
Methods
Study species. F. thurberi is a densely tufted, perennial cool-season grass with
blades 6-20 cm long, 1.5-3 cm wide when flat (Shaw 2008). It can be found in
meadows, dry, rocky slopes and hills, and open forests in montane and subalpine
regions of Southern Wyoming, Utah, Colorado, and New Mexico (Darbyshire and
Pavlick 2007). The Epichloë species under study was recently discovered by Dr.
Jennifer Rudgers and has not yet been named. It lives only in live grass hosts
(Kuldau et al. 1997); thus, any effects of this endophyte on litter decomposition will
be due to its legacy effect on the composition of other microbial associates present
in the litter, rather than to a direct effect of a live endophyte. It has also been found
that the abundance of Epichloë endophytes decreases with elevation (Figure 1).
Study sites. A total of three altitudinal transects were run up three separate
mountains, one along Avery Peak, the second along Cinnamon Mountain, and the
6. third along Treasury Mountain (Figure 2 and Table 1). Study plots were placed
every ~200 meters starting from the base of each mountain for a total of six plots
per transect.
Litter bag construction. Each study plot was given six litter decomposition
bags: three experimental bags containing 5g of E+ F. thurberi litter, and the three
control bags containing 5g of E- F. thurberi litter following the methods of Shaw and
Harte (2001). The bags were constructed from nylon window screening (4 cm X 10
cm) with sewn edges, and then closed with plastic quilting staples. Litter for the
experimental bags contained a mix of litter from 10 E+ F. thurberi individuals, while
the controls contained the litter of 10 E- F. thurberi to maintain similar genetic
variation between treatments. The litter was collected from naturally occurring
plants at a site near the Rocky Mountain Biological Laboratory (RMBL)
(38.96255014, -106.9852277; elevation 2992 m). The litter originated from
naturally occurring plants near the RMBL that was scored for endophyte presence
using aniline blue lactic acid stain following Bacon and White (1994).
Timing of collection. One experimental bag and one control bag will be
collected from each deployment site at each of three preselected collection times:
September 2014, July 2015, and August 2015. Following collection, bags will be air-
dried then weighed to the nearest 0.0001 g. Decomposition rate will be calculated,
and a general linear model will test how decomposition rate is affected by elevation
(continuous factor), endophyte-presence (categorical factor), and the interaction
between elevation and endophyte-presence.
7. A potential problem involved in our approach is the use of litter from
naturally occurring E+ and E- F. thurberi. In order to be able to directly determine
causality, it would be best to culture the endophytes in a lab setting and inoculate
them onto endophyte-free plants as well as performing experimental removal of the
endophyte. By using naturally occurring material, there is no way to definitively
know that fungal presence is the driving factor behind our decomposition rates.
However, due to the exploratory nature of the project, the results retrieved will still
be suggestive of the endophyte’s effect on decomposition and will help us to
determine whether time- and labor-intensive manipulations may be worth
pursuing.
Fungal cultures. In addition to field manipulation, we cultured fungi from
litter and live leaves in a lab using sterile technique under a Labconco Purifier
Logic+ Class II, Type A2 biological safety cabinet. We grew cultures on potato
dextrose agar plates containing penicillin and streptomycin to suppress bacterial
growth. We subcultured via hyphal tipping onto separate plates as fungi emerged
from the tissue. After two weeks, a PERMANOVA analysis was run using EcoSim
software to understand how well fungal morphotypes differed between plate
groups.
Results/Discussion, Part I
(Results of decomposition experiment forthcoming)
Fungal cultures. Tissue type (tiller vs. litter) played a significant role
(p=0.0004) in determining fungal morphotype composition differences between
plates (Figure 2), while endophyte status (E+ vs. E-) did not.
8. Figure1: Altitudinal pattern in endophyte frequency in Festuca thurberi from data collected across 62
populations sampled between 2011 and 2013. For each population, a minimum of 12 individual plants
was scored for endophyte presenceusing aniline blue stain on thin sections of the inner leaf sheath.
11. Gradient Latitude Longitude Elevation (m)
Avery Peak
38.8652 -106.9124 2732
38.9451 -106.9828 2812
38.9608 -106.9905 2899
38.9623 -106.9849 2996
38.9715 -106.9842 3192
38.9752 -106.9783 3344
Cinnamon
Mountain
38.8974 -106.9793 2798
38.8816 -106.9618 2746
38.9347 -107.0112 2956
38.9454 -107.0281 3044
38.9601 -107.0314 3166
38.9706 -107.0295 3372
Treasury Mountain
38.9188 -107.0365 2770
38.9334 -107.0494 2832
38.9537 -107.0614 2875
38.9651 -107.0598 3073
38.9707 -107.0587 3221
38.9863 -107.0619 3394
Table 1: GPS coordinates of litter bag deployment sites
Discussion
The difference in fungal communities associated with live vs. dead plant
matter is not surprising. Further analysis is needed to identify the species that were
isolated, but a tentative hypothesis would be that there is a higher abundance of
saprotrophic fungi in the litter cultures compared to the tiller cultures.
No data regarding the decomposition experiment have been gathered yet,
given that it will require at least until the end of summer 2015 to yield useful
results.
Once all facets of this study have been completed, we will be able to correlate
associated fungal species from the plating project with decomposition rates to see if
certain taxa or combinations of taxa have an effect on carbon cycling, and future
12. models will be able to incorporate these data to better understand overall
ecosystem functioning in the context of shifting climates.
Plant-associated fungal endophytes play an important role both in the lives
of their hosts and in the ecosystems of which they are a part. This study hopes to
provide further information on these organisms of which relatively little is known.
In addition, the onset of global climate change threatens the stability of
natural systems worldwide, understanding how decomposition might change as a
result is therefore paramount to predicting overall ecosystem functioning in the
future. This will allow for more informed conservation efforts and adaptive
strategies in the future.
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16. Part II: How does endophyte symbiosis affect host survival and growth?
Introduction
Plant-symbiotic endophytic fungi are found almost everywhere on the planet,
with a diversity rivaling that of insects (Caroll 1988; Arnold et al. 2000), and are
estimated to inhabit 20-30% of all grass species (Leuchtmann 1992). These fungi
provide various services to their hosts including protection from herbivory (Clay
1996), pathogen damage (Arnold et al. 2003), and abiotic stress (Malinowski &
Belesky 2000; Song et al. 2012) in exchange for organic materials. Fungal symbioses
may also be important in mitigating abiotic stresses caused by climate change
(Marks & Clay 1996; Kivlin et al. 2013), as well as altering ecosystem processes and
characteristics such as forest succession (Rudgers et al. 2007) and species diversity
(Rudgers & Clay 2008).
Fungal endophytes can have diverse effects on the ecology of their host
plants. For example, endophyte presence increased biomass production within
Phragmites australis (Ernst et al. 2003). However, this effect may reverse depending
on abiotic conditions such as water availability (Morse et al. 2002; Zhang and Nan
2007), and/or at what point in the plant’s life cycle one takes measurements
(Spiering et al. 2006). Another study found that endophyte presence decreased host
plant biomass and survival ability of, but increased their reproductive capabilities
(Rudgers et al. 2012). It has also been found that the number of plant-endophyte
symbioses decrease with elevation (see figure 1).
17. We used a common garden experiment at the RMBL to test for effects of
endophyte symbiosis on the survival and growth of a dominant, native host plant,
Festuca thurberi. Because this experiment did not take place under water-limited
conditions, we hypothesize that endophyte presence will have a negative effect on
plant biomass and survival.
Methods
Common garden experiment. During summer 2011, individuals of F. thurberi
from three different treatments were planted at the same site as our litter
collections took place (38.96255014, -106.9852277; elevation 2992 m). These
treatments included E+ plants, E- plants that had their endophyte removed
experimentally using the fungicide Benomyl (EB-), and control E- plants (EC-) that
were naturally endophyte-free. We used a series of ANCOVA analyses in SAS to
compare survival rates, tiller and inflorescence counts, and height between E+ and
E- plants, as well as between benomyl-treated E- and naturally E- individuals.
Seed collection. We collected seeds from naturally occurring plants at the site
during September 2010.
Endophyte removal. Seeds slated for endophyte removal were placed in petri
plates with Benomyl (2g/L) for 5 weeks at 4°C. Control seeds were placed on petri
plates with water at 4C for the same time period. Plates were removed from the
cold stratification and seedlings were allowed to germinate in the greenhouse.
Plant propagation. As seedlings germinated, we transferred them into plastic
12 packs filled with Pro-mix soil where they grew for 2 to 6 weeks. Then, plants
were transplanted into 10 cm square pots filled with 1:1 mixture of Pro-mix and
18. play sand for 2 to 8 weeks before being re-potted into large pots (6.4 cm diameter,
35.6 cm deep), in which they grew for 4-6 weeks before transfer to the field. Pots
were acclimated to field conditions for 1 week prior to transplanting into the
common garden during which time leaves were misted daily to reduce the effects of
change in humidity relative to the greenhouse.
Common garden design. On July 1, 2011, plants were planted in three rows
and spaced 1 m apart. Plants were planted into the existing vegetation which
included the native F. thurberi from which the seeds were collected. Each plant was
randomly assigned to a location in the garden and tagged with a landscape staple
and metal tag on the roadward side, and with the original plastic tag on the
fenceward side. Plants were also marked with a colored stake flag. After
transplanting, the plants were watered on July 1, July 3, July 5, July 21, July 23, and
August 27 applying 1.89 L tap water per plant. No further manipulations were
applied after these waterings.
Response variables. Initial tiller counts, influorescence counts, height,
survival, and gopher disturbance data were collected upon transfer of plants into
the garden on July 1, 2011, then retaken on August 23, 2012, August 31, 2013, and
July 30, 2014. A series of two-way ANCOVAs were used to compare means of each
variable between years.
Results
Survival rates. We found that endophyte-free plants had higher survival rates
(p=0.0009) than endophyte-symbiotic plants, however, this effect did not change
19. significantly between years (Figure 4). The Benomyl treatment had no effect on
survivability.
Tiller counts. The data suggest that there was a significant difference
(p=0.0012) in average tiller counts per year between E+ and E- plants, E- plants
have, on average, a higher number of tillers (Figure 5). Year and the interaction
between year and endophyte status were not found to be significant factors,
although in 2014, the trend was for higher tiller numbers in E+ compared to E-
plants. There was no effect of benomyl on tiller counts of E- plants.
Inflorescence counts. We found no factors influencing inflorescence counts
between E+ vs. E- treatments, nor benomyl vs. naturally E- treatments, but very few
plants (2) have reproduced.
Plant height. There were no significant factors influencing plant height.
However, year was nearly significant (p=0.0861) (Figure 6). Benomyl had no effect
on height.
21. Figure6: Height comparisonof E+ vs. E- plants 2012-2014
Conclusion/Discussion II
Our results followed patterns discovered in past studies, indicating that
endophyte presence may have an overall negative effect on survival and biomass of
Festuca thurberi. This perceived detriment could possibly be mitigated if the
endophyte were to enhance its host’s reproductive abilities, as was shown by
Rudgers et al. 2012. However, the possibility that the endophyte may have been
behaving parasitically should not be discounted (Morse et al. 2002; Faeth & Sullivan
2003; Kogel et al. 2006). Further experimentation will be needed in order to
determine the validity of either of these hypotheses.
This work helps to further elucidate the complex interactions between fungal
endophytes and their plant hosts. These symbioses are dynamic and not always
Year
2012 2013 2014
Height(cm)
10
20
30
40
50
E+
E-
22. mutualistic in nature. Gaining additional knowledge of how these two types of
organisms interact with one another in the context of environmental conditions will
provide ecologists with an enhanced understanding of how communities behave
and why they are subject to certain changes and variations. Furthermore, a
thorough understanding of community behavior will provide for more powerful
analytical ecosystem models that will be useful for predicting and monitoring
responses to climate change and other forms of disturbance.
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Arnold, A. E., Mejía, L. C., Kyllo, D., Rojas, E. I., Maynard, Z., Robbins, N., & Herre, E. A.
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